2KAX Metal Binding Protein date Nov 17, 2008
title Solution Structure And Dynamics Of S100a5 In The Apo And Ca2 States
authors I.Bertini, S.Das Gupta, X.Hu, T.Karavelas, C.Luchinat, G.Parigi, J Structural Proteomics In Europe (Spine), Structural Proteomi Europe 2 (Spine-2)
compound source
Molecule: Protein S100-A5
Chain: A, B
Synonym: S100 Calcium-Binding Protein A5, Protein S-100d
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet21a
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSolution structure and dynamics of S100A5 in the apo and Ca(2+)-bound states., Bertini I, Das Gupta S, Hu X, Karavelas T, Luchinat C, Parigi G, Yuan J, J Biol Inorg Chem. 2009 Jun 18. PMID:19536568
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1660 Kb) [Save to disk]
  • Biological Unit Coordinates (2kax.pdb1.gz) 53 Kb
  • CSU: Contacts of Structural Units for 2KAX
  • Likely Quarternary Molecular Structure file(s) for 2KAX
  • Original NMR restraints for 2KAX from PDB
  • Retrieve 2KAX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KAX from S2C, [Save to disk]
    • View 2KAX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KAX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KAX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kax_A] [2kax_B] [2kax]
  • SWISS-PROT database: [P33763]
  • Domain organization of [S10A5_HUMAN] by SWISSPFAM
  • Domain found in 2KAX: [S_100 ] by SMART
    • Other resources with information on 2KAX
  • Community annotation for 2KAX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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