2KB8 Hormone date Nov 21, 2008
title The Dynamic Alpha-Helix Structure Of Micelle-Bound Human Amy
authors S.M.Patil, S.Xu, S.R.Sheftic, A.T.Alexandrescu
compound source
Molecule: Islet Amyloid Polypeptide
Chain: A
Synonym: Amylin, Diabetes-Associated Peptide, Dap, Insulino Peptide;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Iapp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Other_details: Recombinant 15n-Labeled Amylin Was Purchased Rpeptide
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDynamic alpha-helix structure of micelle-bound human amylin., Patil SM, Xu S, Sheftic SR, Alexandrescu AT, J Biol Chem. 2009 May 1;284(18):11982-91. Epub 2009 Feb 24. PMID:19244249
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (273 Kb) [Save to disk]
  • Biological Unit Coordinates (2kb8.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 2KB8
  • Original NMR restraints for 2KB8 from PDB
  • Retrieve 2KB8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KB8 from S2C, [Save to disk]
    • View 2KB8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KB8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KB8, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kb8_A] [2kb8]
  • SWISS-PROT database: [P10997]
  • Domain organization of [IAPP_HUMAN] by SWISSPFAM
  • Domain found in 2KB8: [CALCITONIN ] by SMART
    • Other resources with information on 2KB8
  • Community annotation for 2KB8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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