2KET Antibiotic date Feb 03, 2009
title Solution Structure Of Bmap-27
authors S.Yang, H.Jung, J.Kim
compound source
Molecule: Cathelicidin-6
Chain: A
Fragment: Cathelicidin-6 Domain, Unp Residues 132-157
Synonym: Antibacterial Peptide Bmap-27, Myeloid Antibacteri 27;
Engineered: Yes
 Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet31.B
methodSolution NMR
ligand NH2 enzyme
note 2KET is a representative structure
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (171 Kb) [Save to disk]
  • Biological Unit Coordinates (2ket.pdb1.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 2KET
  • CSU: Contacts of Structural Units for 2KET
  • Original NMR restraints for 2KET from PDB
  • Retrieve 2KET in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KET from S2C, [Save to disk]
    • View 2KET in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KET
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KET, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ket_A] [2ket]
  • SWISS-PROT database: [P54228]
  • Belongs to the cathelicidin (cathelicidin) family according to TCDB.
  • Domain organization of [CTHL6_BOVIN] by SWISSPFAM
    • Other resources with information on 2KET
  • Community annotation for 2KET at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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