2KFW	Isomerase	date	Feb 28, 2009
title	Solution Structure Of Full-Length Slyd From E.Coli
authors	L.Martino, Y.He, K.L.Hands-Taylor, E.R.Valentine, G.Kelly, C.Gian M.R.Conte
compound		source
Molecule: Fkbp-Type Peptidyl-Prolyl Cis-Trans Isomerase Sly Chain: A Synonym: Ppiase, Rotamase, Histidine-Rich Protein, Whp Ec: 5.2.1.8 Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Slyd, B3349, Jw3311 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: M15 Expression_system_vector: Pqe60
method	Solution NMR
ligand		enzyme	Isomerase E.C.5.2.1.8 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	The interaction of the Escherichia coli protein SlyD with nickel ions illuminates the mechanism of regulation of its peptidyl-prolyl isomerase activity., Martino L, He Y, Hands-Taylor KL, Valentine ER, Kelly G, Giancola C, Conte MR, FEBS J. 2009 Aug;276(16):4529-44. Epub 2009 Jul 23. PMID:19645725

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (944 Kb) [Save to disk] Biological Unit Coordinates (2kfw.pdb1.gz) 48 Kb CSU: Contacts of Structural Units for 2KFW Original NMR restraints for 2KFW from PDB Retrieve 2KFW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2KFW from S2C, [Save to disk]

View 2KFW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2KFW

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2KFW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2kfw] [2kfw_A] SWISS-PROT database: [P0A9K9] Domain organization of [SLYD_ECOLI] by SWISSPFAM

Other resources with information on 2KFW

Community annotation for 2KFW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---