2KJA Toxin date May 26, 2009
title Chemical Shift Assignments, Constraints, And Coordinates For Scorpion Toxin
authors A.Prochnicka-Chalufour, G.Corzo, B.I.Garcia, L.D.Possani, M.Dele
compound source
Molecule: Beta-Toxin Cn5
Chain: A
Synonym: Cngtii
 Organism_scientific: Centruroides Noxius
Organism_common: Mexican Scorpion
Organism_taxid: 6878
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Primary referenceSolution structure of Cn5, a crustacean toxin found in the venom of the scorpions Centruroides noxius and Centruroides suffusus suffusus., Corzo G, Prochnicka-Chalufour A, Garcia BI, Possani LD, Delepierre M, Biochim Biophys Acta. 2009 Nov;1794(11):1591-8. Epub 2009 Jul 21. PMID:19631296
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (242 Kb) [Save to disk]
  • Biological Unit Coordinates (2kja.pdb1.gz) 16 Kb
  • CSU: Contacts of Structural Units for 2KJA
  • Original NMR restraints for 2KJA from PDB
  • Retrieve 2KJA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KJA from S2C, [Save to disk]
    • View 2KJA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KJA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KJA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kja_A] [2kja]
  • SWISS-PROT database: [P45663]
  • Domain organization of [SCX5_CENNO] by SWISSPFAM
  • Domain found in 2KJA: [Knot1 ] by SMART
    • Other resources with information on 2KJA
  • Community annotation for 2KJA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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