2KKQ Structural Protein date Jun 29, 2009
title Solution Nmr Structure Of The Ig-Like C2-Type 2 Domain Of Hu Myotilin. Northeast Structural Genomics Target Hr3158.
authors P.Rossi, R.Shastry, C.Ciccosanti, K.Hamilton, R.Xiao, T.B.Acton, G.V.T.Swapna, R.Nair, J.K.Everett, B.Rost, G.T.Montelione, North Structural Genomics Consortium (Nesg)
compound source
Molecule: Myotilin
Chain: A
Fragment: Ig-Like C2-Type 2 Domain
Synonym: Titin Immunoglobulin Domain Protein, Myofibrillar Ig Domains Protein, 57 Kda Cytoskeletal Protein;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Myot, Ttid
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector: Pet 14-15c
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (725 Kb) [Save to disk]
  • Biological Unit Coordinates (2kkq.pdb1.gz) 37 Kb
  • CSU: Contacts of Structural Units for 2KKQ
  • Original NMR restraints for 2KKQ from PDB
  • Retrieve 2KKQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KKQ from S2C, [Save to disk]
    • View 2KKQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KKQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KKQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kkq] [2kkq_A]
  • SWISS-PROT database: [Q9UBF9]
  • Domain organization of [MYOTI_HUMAN] by SWISSPFAM
  • Domain found in 2KKQ: [IGc2 ] by SMART
    • Other resources with information on 2KKQ
  • Community annotation for 2KKQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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