2KLG Signaling Protein date Jul 02, 2009
title Pere Nmr Structure Of Ubiquitin
authors T.Madl, W.Bermel, K.Zangger
compound source
Molecule: Ubiquitin
Chain: A
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Chemical Company Compound
methodSolution NMR
Primary referenceUse of Relaxation Enhancements in a Paramagnetic Environment for the Structure Determination of Proteins Using NMR Spectroscopy., Madl T, Bermel W, Zangger K, Angew Chem Int Ed Engl. 2009 Sep 22. PMID:19774576
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (412 Kb) [Save to disk]
  • Biological Unit Coordinates (2klg.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 2KLG
  • Original NMR restraints for 2KLG from PDB
  • Retrieve 2KLG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KLG from S2C, [Save to disk]
  • View 2KLG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KLG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KLG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2klg_A] [2klg]
  • SWISS-PROT database: [P62988]
  • Domain organization of [UBIQ_HUMAN] by SWISSPFAM
  • Domain found in 2KLG: [UBQ ] by SMART
  • Other resources with information on 2KLG
  • Community annotation for 2KLG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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