2KLV Membrane Protein date Jul 08, 2009
title Membrane-Bound Structure Of The Pf1 Major Coat Protein In Dh
authors S.Park, W.Son, R.Mukhopadhyay, H.Valafar, S.J.Opella
compound source
Molecule: Capsid Protein G8p
Chain: A
Synonym: Gene 8 Protein, G8p, Coat Protein B, Major Coat Pr
Engineered: Yes
Organism_scientific: Pseudomonas Phage Pf1
Organism_common: Bacteriophage Pf1
Organism_taxid: 10871
Gene: Viii
Expression_system: Pseudomonas Aeruginosa
Expression_system_taxid: 287
Expression_system_vector: Pf1 Phage
methodSolution NMR
Primary referencePhage-Induced Alignment of Membrane Proteins Enables the Measurement and Structural Analysis of Residual Dipolar Couplings with Dipolar Waves and lambda-Maps., Park SH, Son WS, Mukhopadhyay R, Valafar H, Opella SJ, J Am Chem Soc. 2009 Sep 17. PMID:19761238
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (2klv.pdb1.gz) 5 Kb
  • CSU: Contacts of Structural Units for 2KLV
  • Original NMR restraints for 2KLV from PDB
  • Retrieve 2KLV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KLV from S2C, [Save to disk]
  • View 2KLV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KLV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KLV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2klv] [2klv_A]
  • SWISS-PROT database: [P03621]
  • Domain organization of [CAPSD_BPPF1] by SWISSPFAM
  • Other resources with information on 2KLV
  • Community annotation for 2KLV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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