2KMM Hydrolase date Jul 31, 2009
title Solution Nmr Structure Of The Tgs Domain Of Pg1808 From Porp Gingivalis. Northeast Structural Genomics Consortium Target (418-481)
authors Y.Yang, T.A.Ramelot, J.R.Cort, D.Lee, C.Ciccosanti, K.Hamilton, R. B.Rost, T.B.Acton, R.Xiao, G.Swapna, J.K.Everett, G.T.Montelione M.A.Kennedy, Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Guanosine-3',5'-Bis(Diphosphate) 3'-Pyrophosphohy
Chain: A
Fragment: Sequence Database Residues 418-481
Engineered: Yes
 Organism_scientific: Porphyromonas Gingivalis
Organism_taxid: 837
Gene: Pg1808, Pg_1808, Spot
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Pmgk
Expression_system_vector: Pet 21-23c
methodSolution NMR
Gene PG
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (378 Kb) [Save to disk]
  • Biological Unit Coordinates (2kmm.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 2KMM
  • Original NMR restraints for 2KMM from PDB
  • Retrieve 2KMM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KMM from S2C, [Save to disk]
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  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KMM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KMM, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kmm_A] [2kmm]
  • SWISS-PROT database: [Q7MAV5]
  • Domain organization of [Q7MAV5_PORGI] by SWISSPFAM
    • Other resources with information on 2KMM
  • Community annotation for 2KMM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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