2KQS Phosphorylation of SUMO-interacting motif by CK2 enhances Daxx SUMO binding activity date
authors Naik, M.T., Huang, T.H., Shih, H.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and functional roles of Daxx SIM phosphorylation in SUMO paralog-selective binding and apoptosis modulation., Chang CC, Naik MT, Huang YS, Jeng JC, Liao PH, Kuo HY, Ho CC, Hsieh YL, Lin CH, Huang NJ, Naik NM, Kung CC, Lin SY, Chen RH, Chang KS, Huang TH, Shih HM, Mol Cell. 2011 Apr 8;42(1):62-74. PMID:21474068
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (698 Kb) [Save to disk]
  • Biological Unit Coordinates (2kqs.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 2KQS
  • Original NMR restraints for 2KQS from PDB
  • Retrieve 2KQS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KQS from S2C, [Save to disk]
    • View 2KQS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KQS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KQS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kqs_B] [2kqs_A] [2kqs]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2KQS: [UBQ ] by SMART
    • Other resources with information on 2KQS
  • Community annotation for 2KQS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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