2KSF Transferase date Jan 03, 2010
title Backbone Structure Of The Membrane Domain Of E. Coli Histidi Receptor Kdpd, Center For Structures Of Membrane Proteins ( Target 4312c
authors I.Maslennikov, C.Klammt, G.Kefala, M.Okamura, L.Esquivies, W.Kwia S.Choe, Center For Structures Of Membrane Proteins (Csmp)
compound source
Molecule: Sensor Protein Kdpd
Chain: A
Fragment: Sequence Database Residues 397-502
Ec: 2.7.13.3
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
Gene: B0695, Jw0683, Kdpd
Expression_system: Cell-Free Synthesis
Expression_system_vector: Pivex2.3
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.13.3 BRENDA
Primary referenceMembrane domain structures of three classes of histidine kinase receptors by cell-free expression and rapid NMR analysis., Maslennikov I, Klammt C, Hwang E, Kefala G, Okamura M, Esquivies L, Mors K, Glaubitz C, Kwiatkowski W, Jeon YH, Choe S, Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):10902-7. Epub 2010 May 24. PMID:20498088
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (556 Kb) [Save to disk]
  • Biological Unit Coordinates (2ksf.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 2KSF
  • Original NMR restraints for 2KSF from PDB
  • Retrieve 2KSF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KSF from S2C, [Save to disk]
    • View 2KSF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KSF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KSF, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ksf_A] [2ksf]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2KSF
  • Community annotation for 2KSF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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