2KV9 Cell Adhesion date Mar 10, 2010
title Integrin Beta3 Subunit In A Disulfide Linked Alphaiib-Beta3 Domain
authors D.G.Metcalf, J.M.Kielec, K.G.Valentine, A.Wand, J.S.Bennett, D.F. D.T.Moore, K.Molnar
compound source
Molecule: Integrin Beta-3
Chain: B
Fragment: Unp Residues 739-788
Synonym: Platelet Membrane Glycoprotein Iiia, Gpiiia
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Itgb3, Gp3a
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-15b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceNMR analysis of the {alpha}IIb{beta}3 cytoplasmic interaction suggests a mechanism for integrin regulation., Metcalf DG, Moore DT, Wu Y, Kielec JM, Molnar K, Valentine KG, Wand AJ, Bennett JS, Degrado WF, Proc Natl Acad Sci U S A. 2010 Dec 28;107(52):22481-6. Epub 2010 Dec 14. PMID:21156831
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (297 Kb) [Save to disk]
  • Biological Unit Coordinates (2kv9.pdb1.gz) 15 Kb
  • CSU: Contacts of Structural Units for 2KV9
  • Original NMR restraints for 2KV9 from PDB
  • Retrieve 2KV9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KV9 from S2C, [Save to disk]
    • View 2KV9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KV9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KV9, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kv9] [2kv9_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2KV9: [Integrin_b_cyt ] by SMART
    • Other resources with information on 2KV9
  • Community annotation for 2KV9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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