2KWI Transport Protein, Protein Binding date Apr 12, 2010
title Ralb-Rlip76 (Ralbp1) Complex
authors R.B.Fenwick, L.J.Campbell, K.Rajasekar, S.Prasannan, D.Nietlispa J.Camonis, D.Owen, H.R.Mott
compound source
Molecule: Ras-Related Protein Ral-B
Chain: A
Fragment: Unp Residues 8-185
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ralb
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet16b

Molecule: Rala-Binding Protein 1
Chain: B
Fragment: Unp Residues 393-446
Synonym: Ralbp1, Ral-Interacting Protein 1, 76 Kda Ral-Inte Protein, Dinitrophenyl S-Glutathione Atpase, Dnp-Sg Atpase;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ralbp1, Rlip1, Rlip76
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pgex2t
methodSolution NMR
ligand GNP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceThe RalB-RLIP76 complex reveals a novel mode of ral-effector interaction., Fenwick RB, Campbell LJ, Rajasekar K, Prasannan S, Nietlispach D, Camonis J, Owen D, Mott HR, Structure. 2010 Aug 11;18(8):985-95. PMID:20696399
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3264 Kb) [Save to disk]
  • Biological Unit Coordinates (2kwi.pdb1.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 2KWI
  • CSU: Contacts of Structural Units for 2KWI
  • Original NMR restraints for 2KWI from PDB
  • Retrieve 2KWI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KWI from S2C, [Save to disk]
    • View 2KWI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KWI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KWI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kwi_B] [2kwi] [2kwi_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2KWI: [RAS ] by SMART
    • Other resources with information on 2KWI
  • Community annotation for 2KWI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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