2L11	Transcription Regulator	date	Jul 22, 2010
title	Solution Nmr Structure Of The Cbx3 In Complex With H3k9me3 P
authors	L.Kaustov, A.Lemak, C.Fares, A.Gutmanas, H.Quang, P.Loppnau, J.Min A.Edwards, C.Arrowsmith, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Chromobox Protein Homolog 3 Chain: A Fragment: Unp Residues 29-81 Synonym: Heterochromatin Protein 1 Homolog Gamma, Hp1 Gamma Protein, Hech; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cbx3 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Codon Plus Ril Expression_system_vector: Pet28a-Mhl
Molecule: Histone H3 Chain: B Fragment: Unp Residues 2-16 Engineered: Yes		Synthetic: Yes Organism_scientific: Xenopus Laevis Organism_common: Clawed Frog,Common Platanna,Platanna Organism_taxid: 8355 Other_details: H3k9me3 15-Mer Peptide
method	Solution NMR
ligand	M3L	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Recognition and specificity determinants of the human cbx chromodomains., Kaustov L, Ouyang H, Amaya M, Lemak A, Nady N, Duan S, Wasney GA, Li Z, Vedadi M, Schapira M, Min J, Arrowsmith CH, J Biol Chem. 2011 Jan 7;286(1):521-9. Epub 2010 Nov 3. PMID:21047797

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (378 Kb) [Save to disk] Biological Unit Coordinates (2l11.pdb1.gz) 20 Kb LPC: Ligand-Protein Contacts for 2L11 CSU: Contacts of Structural Units for 2L11 Original NMR restraints for 2L11 from PDB Retrieve 2L11 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2L11 from S2C, [Save to disk]

View 2L11 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2L11

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2L11, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2l11_A] [2l11] [2l11_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2L11: [CHROMO ] by SMART

Other resources with information on 2L11

Community annotation for 2L11 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---