2LB7 Antimicrobial Protein date Mar 23, 2011
title Hevein-Type Antifungal Peptide With A Unique 10-Cysteine Mot
authors T.A.Balashova, A.A.Vassilevski, T.I.Odintsova, E.V.Grishin, T.A. A.S.Arseniev
compound source
Molecule: Antimicrobial Peptide 1a
Chain: A
Synonym: Wamp-1a
Engineered: Yes
 Organism_scientific: Triticum Kiharae
Organism_common: Wheat
Organism_taxid: 376535
Strain: Dorof. & Migush.
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet-32b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of a defense peptide from wheat with a 10-cysteine motif., Dubovskii PV, Vassilevski AA, Slavokhotova AA, Odintsova TI, Grishin EV, Egorov TA, Arseniev AS, Biochem Biophys Res Commun. 2011 Jul 22;411(1):14-8. Epub 2011 Jun 14. PMID:21704019
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (214 Kb) [Save to disk]
  • Biological Unit Coordinates (2lb7.pdb1.gz) 11 Kb
  • CSU: Contacts of Structural Units for 2LB7
  • Original NMR restraints for 2LB7 from PDB
  • Retrieve 2LB7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LB7 from S2C, [Save to disk]
    • View 2LB7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2LB7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LB7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lb7_A] [2lb7]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LB7: [ChtBD1 ] by SMART
    • Other resources with information on 2LB7
  • Community annotation for 2LB7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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