2LBS Solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (Rnt1p) in complex with AAGU tetraloop hairpin date
authors Wang, Z., Hartman, E., Roy, K., Chanfreau, G., Feigon, J.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceStructure of a yeast RNase III dsRBD complex with a noncanonical RNA substrate provides new insights into binding specificity of dsRBDs., Wang Z, Hartman E, Roy K, Chanfreau G, Feigon J, Structure. 2011 Jul 13;19(7):999-1010. PMID:21742266
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (657 Kb) [Save to disk]
  • Biological Unit Coordinates (2lbs.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 2LBS
  • Original NMR restraints for 2LBS from PDB
  • Retrieve 2LBS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LBS from S2C, [Save to disk]
    • View 2LBS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2LBS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LBS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lbs] [2lbs_A] [2lbs_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LBS: [DSRM ] by SMART
    • Other resources with information on 2LBS
  • Community annotation for 2LBS at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science