2LG5 Antimicrobial Protein date Jul 21, 2011
title Nmr Structure Of Chicken Avbd2 Defensin
authors H.Meudal, C.Landon
compound source
Molecule: Gallinacin-2
Chain: A
Synonym: Gal-2, Beta-Defensin 2
Engineered: Yes
Synthetic: Yes
Organism_scientific: Gallus Gallus
Organism_common: Bantam,Chickens
Organism_taxid: 9031
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInitial insights into structure-activity relationships of avian defensins., Derache C, Meudal H, Aucagne V, Mark KJ, Cadene M, Delmas AF, Lalmanach AC, Landon C, J Biol Chem. 2012 Mar 2;287(10):7746-55. Epub 2011 Dec 27. PMID:22205704
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (2lg5.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 2LG5
  • Original NMR restraints for 2LG5 from PDB
  • Retrieve 2LG5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LG5 from S2C, [Save to disk]
  • View 2LG5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LG5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LG5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lg5_A] [2lg5]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2LG5
  • Community annotation for 2LG5 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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