2LY4 HMGB1-facilitated p53 DNA binding occurs via HMG-box/p53 transactivation domain interaction and is regulated by the acidic tail date
authors Rowell, J.P., Simpson, K.L., Stott, K., Watson, M., Thomas, J.O.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceHMGB1-Facilitated p53 DNA Binding Occurs via HMG-Box/p53 Transactivation Domain Interaction, Regulated by the Acidic Tail., Rowell JP, Simpson KL, Stott K, Watson M, Thomas JO, Structure. 2012 Oct 9. pii: S0969-2126(12)00338-3. doi:, 10.1016/j.str.2012.09.004. PMID:23063560
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (352 Kb) [Save to disk]
  • Biological Unit Coordinates (2ly4.pdb1.gz) 36 Kb
  • CSU: Contacts of Structural Units for 2LY4
  • Original NMR restraints for 2LY4 from PDB
  • Retrieve 2LY4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LY4 from S2C, [Save to disk]
    • View 2LY4 in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2LY4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LY4, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ly4_B] [2ly4] [2ly4_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LY4: [HMG ] by SMART
    • Other resources with information on 2LY4
  • Community annotation for 2LY4 at PDBWiki (http://pdbwiki.org)
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