2LZ6 Distinct ubiquitin binding modes exhibited by sh3 domains: molecular determinants and functional implications date
authors Ortega-Roldan, J., Azuaga, A., Blackledge, M., Nuland, N.Van.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceDistinct Ubiquitin Binding Modes Exhibited by SH3 Domains: Molecular Determinants and Functional Implications., Ortega Roldan JL, Casares S, Ringkjobing Jensen M, Cardenes N, Bravo J, Blackledge M, Azuaga AI, van Nuland NA, PLoS One. 2013 Sep 11;8(9):e73018. doi: 10.1371/journal.pone.0073018. PMID:24039852
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (391 Kb) [Save to disk]
  • Biological Unit Coordinates (2lz6.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 2LZ6
  • Original NMR restraints for 2LZ6 from PDB
  • Retrieve 2LZ6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LZ6 from S2C, [Save to disk]
  • View 2LZ6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LZ6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LZ6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lz6] [2lz6_A] [2lz6_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 2LZ6: [SH3] [UBQ ] by SMART
  • Other resources with information on 2LZ6
  • Community annotation for 2LZ6 at PDBWiki (http://pdbwiki.org)

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