2M0X De Novo Protein date Nov 08, 2012
title Solution Structure Of U14ub1, An Engineered Ubiquitin Varian Increased Affinity For Usp14
authors A.H.Phillips, W.J.Fairbrother, J.E.Corn
compound source
Molecule: Engineered Ubiquitin Variant
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
methodSolution NMR
Primary referenceConformational dynamics control ubiquitin-deubiquitinase interactions and influence in vivo signaling., Phillips AH, Zhang Y, Cunningham CN, Zhou L, Forrest WF, Liu PS, Steffek M, Lee J, Tam C, Helgason E, Murray JM, Kirkpatrick DS, Fairbrother WJ, Corn JE, Proc Natl Acad Sci U S A. 2013 Jun 25. PMID:23801757
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (203 Kb) [Save to disk]
  • Biological Unit Coordinates (2m0x.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 2M0X
  • Original NMR restraints for 2M0X from PDB
  • Retrieve 2M0X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M0X from S2C, [Save to disk]
  • View 2M0X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M0X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M0X, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m0x] [2m0x_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M0X: [UBQ ] by SMART
  • Other resources with information on 2M0X
  • Community annotation for 2M0X at PDBWiki (http://pdbwiki.org)

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