2M1J Unknown Function date Nov 28, 2012
title Ovine Doppel Signal Peptide (1-30)
authors J.Pimenta, A.Viegas, J.Sardinha, A.Santos, C.Cantante, F.M.V.Dias R.Soares, E.J.Cabrita, C.M.G.A.Fontes, J.A.M.Prates, R.M.L.N.Pe
compound source
Molecule: Prion-Like Protein Doppel
Chain: A
Fragment: Signal Peptide (Unp Residues 1-30)
Synonym: Prplp
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Ovis Aries
Organism_common: Sheep
Organism_taxid: 9940
methodSolution NMR
Primary referenceNMR solution structure and SRP54M predicted interaction of the N-terminal sequence (1-30) of the ovine Doppel protein., Pimenta J, Viegas A, Sardinha J, Martins IC, Cabrita EJ, Fontes CM, Prates JA, Pereira RM, Peptides. 2013 Aug 23;49C:32-40. doi: 10.1016/j.peptides.2013.08.013. PMID:23973967
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (161 Kb) [Save to disk]
  • Biological Unit Coordinates (2m1j.pdb1.gz) 8 Kb
  • CSU: Contacts of Structural Units for 2M1J
  • Original NMR restraints for 2M1J from PDB
  • Retrieve 2M1J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M1J from S2C, [Save to disk]
    • View 2M1J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2M1J
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M1J, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m1j] [2m1j_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2M1J
  • Community annotation for 2M1J at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science