2M8R Pre-Fusion Solution NMR Structure of Neuronal SNARE Syntaxin 1A date
authors Liang, B., Kiessling, V., Tamm, L.K.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
note 2M8R (Molecule of the Month:pdb167)
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePrefusion structure of syntaxin-1A suggests pathway for folding into neuronal trans-SNARE complex fusion intermediate., Liang B, Kiessling V, Tamm LK, Proc Natl Acad Sci U S A. 2013 Nov 11. PMID:24218570
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (586 Kb) [Save to disk]
  • Biological Unit Coordinates (2m8r.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2M8R
  • Original NMR restraints for 2M8R from PDB
  • Retrieve 2M8R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M8R from S2C, [Save to disk]
  • View 2M8R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M8R
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M8R, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m8r_A] [2m8r]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M8R: [t_SNARE ] by SMART
  • Other resources with information on 2M8R
  • Community annotation for 2M8R at PDBWiki (http://pdbwiki.org)

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