2MDR Solution structure of the third double-stranded RNA-binding domain (dsRBD3) of human adenosine-deaminase ADAR1 date
authors Barraud, P., Banerjee, S., Mohamed, W.I., Jantsch, M.F., Allain, F.H.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceA bimodular nuclear localization signal assembled via an extended double-stranded RNA-binding domain acts as an RNA-sensing signal for transportin 1., Barraud P, Banerjee S, Mohamed WI, Jantsch MF, Allain FH, Proc Natl Acad Sci U S A. 2014 Apr 21. PMID:24753571
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (553 Kb) [Save to disk]
  • Biological Unit Coordinates (2mdr.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 2MDR
  • Original NMR restraints for 2MDR from PDB
  • Retrieve 2MDR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MDR from S2C, [Save to disk]
  • View 2MDR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MDR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2MDR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mdr_A] [2mdr]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2MDR: [DSRM ] by SMART
  • Other resources with information on 2MDR
  • Community annotation for 2MDR at PDBWiki (http://pdbwiki.org)

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