2MLL Ribosome date Mar 16, 1999
title Mistletoe Lectin I From Viscum Album
authors R.Krauspenhaar, S.Eschenburg, M.Perbandt, V.Kornilov, N.Konareva I.Mikailova, S.Stoeva, R.Wacker, T.Maier, T.P.Singh, A.Mikhailov W.Voelter, C.Betzel
compound source
Molecule: Protein (Ribosome-Inactivating Protein Type II)
Chain: A
Organism_scientific: Viscum Album
Organism_common: European Mistletoe
Organism_taxid: 3972

Molecule: Protein (Ribosome-Inactivating Protein Type II)
Chain: B

Organism_scientific: Viscum Album
Organism_common: European Mistletoe
Organism_taxid: 3972
symmetry Space Group: P 65 2 2
R_factor 0.251 R_Free 0.319
crystal
cell
length a length b length c angle alpha angle beta angle gamma
107.648 107.648 311.278 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
ligand NAG enzyme
related structures by homologous chain: 1CE7, 1YF8, 2AAI
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceCrystal structure of mistletoe lectin I from Viscum album., Krauspenhaar R, Eschenburg S, Perbandt M, Kornilov V, Konareva N, Mikailova I, Stoeva S, Wacker R, Maier T, Singh T, Mikhailov A, Voelter W, Betzel C, Biochem Biophys Res Commun 1999 Apr 13;257(2):418-24. PMID:10198229
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk]
  • Biological Unit Coordinates (2mll.pdb1.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 2MLL
  • CSU: Contacts of Structural Units for 2MLL
  • Likely Quarternary Molecular Structure file(s) for 2MLL
  • Retrieve 2MLL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MLL from S2C, [Save to disk]
  • View 2MLL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MLL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2MLL, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2mlla_, region A [Jmol] [rasmolscript] [script source]
        - Domain d2mllb1, region B:1-133 [Jmol] [rasmolscript] [script source]
        - Domain d2mllb2, region B:134-255 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mll_A] [2mll_B] [2mll]
  • SWISS-PROT database: [Q6ITZ3]
  • Domain organization of [ML4_VISAL] by SWISSPFAM
  • Domain found in 2MLL: [RICIN ] by SMART
  • Other resources with information on 2MLL
  • Community annotation for 2MLL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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