2MP9 Solution structure of an potent antifungal peptide Cm-p5 derived from C. muricatus date
authors Sun, Z.J., Heffron, G., Mcbeth, C., Wagner, G., Otero-Gonzales, A.J., Starnbach, M.N.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NH2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCm-p5: an antifungal hydrophilic peptide derived from the coastal mollusk Cenchritis muricatus (Gastropoda: Littorinidae)., Lopez-Abarrategui C, McBeth C, Mandal SM, Sun ZJ, Heffron G, Alba-Menendez A, Migliolo L, Reyes-Acosta O, Garcia-Villarino M, Nolasco DO, Falcao R, Cherobim MD, Dias SC, Brandt W, Wessjohann L, Starnbach M, Franco OL, Otero-Gonzalez AJ, FASEB J. 2015 Aug;29(8):3315-25. doi: 10.1096/fj.14-269860. Epub 2015 Apr 28. PMID:25921828
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (2mp9.pdb1.gz) 4 Kb
  • LPC: Ligand-Protein Contacts for 2MP9
  • CSU: Contacts of Structural Units for 2MP9
  • Original NMR restraints for 2MP9 from PDB
  • Retrieve 2MP9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MP9 from S2C, [Save to disk]
    • View 2MP9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2MP9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mp9_A] [2mp9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2MP9
  • Community annotation for 2MP9 at PDBWiki (http://pdbwiki.org)

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