2MPN 3D NMR structure of the transmembrane domain of the full-length inner membrane protein YgaP from Escherichia coli date
authors Eichmann, C., Tzitzilonis, C., Bordignon, E., Maslennikov, I., Choe, S., Riek, R.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceSolution NMR Structure and Functional Analysis of the Integral Membrane Protein YgaP from E. coli., Eichmann C, Tzitzilonis C, Bordignon E, Maslennikov I, Choe S, Riek R, J Biol Chem. 2014 Jun 23. pii: jbc.M114.571935. PMID:24958726
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (374 Kb) [Save to disk]
  • Biological Unit Coordinates (2mpn.pdb1.gz) 38 Kb
  • CSU: Contacts of Structural Units for 2MPN
  • Original NMR restraints for 2MPN from PDB
  • Retrieve 2MPN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MPN from S2C, [Save to disk]
  • View 2MPN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MPN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2MPN, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mpn_B] [2mpn] [2mpn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2MPN
  • Community annotation for 2MPN at PDBWiki (http://pdbwiki.org)

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