2MWL Antimicrobial Protein date Nov 13, 2014
title Nmr Structure Of Vg16krkp, An Antimicrobial Peptide In Lps
authors A.Bhunia, A.Datta
compound source
Molecule: Antimicrobial Peptide
Chain: A
Engineered: Yes
Synthetic: Yes
methodSolution NMR
Primary referenceAntimicrobial Peptides: Insights into Membrane Permeabilization, Lipopolysaccharide Fragmentation and Application in Plant Disease Control., Datta A, Ghosh A, Airoldi C, Sperandeo P, Mroue KH, Jimenez-Barbero J, Kundu P, Ramamoorthy A, Bhunia A, Sci Rep. 2015 Jul 6;5:11951. doi: 10.1038/srep11951. PMID:26144972
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (2mwl.pdb1.gz) 5 Kb
  • CSU: Contacts of Structural Units for 2MWL
  • Original NMR restraints for 2MWL from PDB
  • Retrieve 2MWL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MWL from S2C, [Save to disk]
  • View 2MWL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MWL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2MWL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mwl_A] [2mwl]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2MWL
  • Community annotation for 2MWL at PDBWiki (http://pdbwiki.org)

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