2NAE Signaling Protein date Dec 23, 2015
title Membrane-Bound Mouse Cd28 Cytoplasmic Tail
authors H.Li, C.Xu, W.Pan
compound source
Molecule: T-Cell-Specific Surface Glycoprotein Cd28
Chain: A
Fragment: Unp Residues 177-218
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Cd28
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet-41a(+)
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDynamic regulation of CD28 conformation and signaling by charged lipids and ions., Yang W, Pan W, Chen S, Trendel N, Jiang S, Xiao F, Xue M, Wu W, Peng Z, Li X, Ji H, Liu X, Jiang H, Wang H, Shen H, Dushek O, Li H, Xu C, Nat Struct Mol Biol. 2017 Oct 23. doi: 10.1038/nsmb.3489. PMID:29058713
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (2nae.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 2NAE
  • Original NMR restraints for 2NAE from PDB
  • Retrieve 2NAE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NAE from S2C, [Save to disk]
    • View 2NAE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2NAE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nae] [2nae_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2NAE
  • Community annotation for 2NAE at PDBWiki (http://pdbwiki.org)

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