2NDN	Plant Protein	date	Jul 26, 2016
title	Nmr Solution Structure Of Paws Derived Peptide 20 (Pdp-20)
authors	B.Franke, A.S.Jayasena, M.F.Fisher, J.E.Swedberg, N.L.Taylor, J.S K.Rosengren
compound		source
Molecule: Paws1a Derived Peptide 20 Chain: A Fragment: Residues 63-78 Engineered: Yes		Synthetic: Yes Organism_scientific: Zinnia Haageana Organism_taxid: 1525732 Other_details: Assembled By Fmoc Solid Phase Peptide Synthe Cyclised By Native Chemical Ligation.
method	Solution NMR
Primary reference	Diverse cyclic seed peptides in the Mexican zinnia (Zinnia haageana)., Franke B, Jayasena AS, Fisher MF, Swedberg JE, Taylor NL, Mylne JS, Rosengren KJ, Biopolymers. 2016 Nov;106(6):806-817. doi: 10.1002/bip.22901. PMID:27352920

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (2ndn.pdb1.gz) 5 Kb CSU: Contacts of Structural Units for 2NDN Original NMR restraints for 2NDN from PDB Retrieve 2NDN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2NDN from S2C, [Save to disk]

View 2NDN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2NDN

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ndn_A] [2ndn] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 2NDN

Community annotation for 2NDN at PDBWiki (http://pdbwiki.org)

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