2NN2 Transcription date Oct 23, 2006
title Crystal Structure Of The Btb Domain From The Lrfzbtb7 Trans Regulator
authors P.J.Stogios, L.Chen, G.G.Prive
compound source
Molecule: Zinc Finger And Btb Domain-Containing Protein 7a
Chain: A, B
Fragment: Btbpoz Domain, Residues 1-131
Synonym: Leukemialymphoma- Related Factor, Factor That Bin Inducer Of Short Transcripts Protein 1, Factor Binding Ist Fbi-1, Hiv-1 1st-Binding Protein 1, Ttf-I-Interacting Pepti Tip21;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zbtb7a, Fbi1, Lrf, Zbtb7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Codonplus
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a
symmetry Space Group: P 41 21 2
R_factor 0.214 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.143 72.143 116.048 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
Primary referenceCrystal structure of the BTB domain from the LRF/ZBTB7 transcriptional regulator., Stogios PJ, Chen L, Prive GG, Protein Sci. 2006 Dec 22;. PMID:17189472
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (2nn2.pdb1.gz) 37 Kb
  • Biological Unit Coordinates (2nn2.pdb2.gz) 74 Kb
  • CSU: Contacts of Structural Units for 2NN2
  • Likely Quarternary Molecular Structure file(s) for 2NN2
  • Structure Factors (242 Kb)
  • Retrieve 2NN2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NN2 from S2C, [Save to disk]
  • Re-refined 2nn2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2NN2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NN2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2NN2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nn2_B] [2nn2] [2nn2_A]
  • SWISS-PROT database: [O95365]
  • Domain organization of [ZBT7A_HUMAN] by SWISSPFAM
  • Domain found in 2NN2: [BTB ] by SMART
  • Other resources with information on 2NN2
  • Community annotation for 2NN2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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