2NNL Oxidoreductase date Oct 24, 2006
title Binding Of Two Substrate Analogue Molecules To Dihydroflavon Reductase Alters The Functional Geometry Of The Catalytic S
authors P.Petit, B.Langlois D'Estaintot, T.Granier, B.Gallois
compound source
Molecule: Dihydroflavonol 4-Reductase
Chain: D, F
Ec: 1.1.1.219
Engineered: Yes
Organism_scientific: Vitis Vinifera
Organism_taxid: 29760
Gene: Dfr1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15(Prep4)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe(30xa)
symmetry Space Group: P 21 21 21
R_factor 0.190 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.825 90.143 93.297 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand ERD, NAP enzyme Oxidoreductase E.C.1.1.1.219 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, D


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk]
  • Biological Unit Coordinates (2nnl.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (2nnl.pdb2.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 2NNL
  • CSU: Contacts of Structural Units for 2NNL
  • Structure Factors (401 Kb)
  • Retrieve 2NNL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NNL from S2C, [Save to disk]
  • Re-refined 2nnl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2NNL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NNL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2NNL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nnl] [2nnl_D] [2nnl_F]
  • SWISS-PROT database: [P51110]
  • Domain organization of [DFRA_VITVI] by SWISSPFAM
  • Other resources with information on 2NNL
  • Community annotation for 2NNL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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