2NV0 Transferase date Nov 10, 2006
title Structure Of The Glutaminase Subunit Pdx2 (Yaae) Of Plp Synt Bacillus Subtilis
authors M.Strohmeier, I.Tews, I.Sinning
compound source
Molecule: Glutamine Amidotransferase Subunit Pdxt
Chain: A, B
Synonym: Glutamine Amidotransferase Glutaminase Subunit Pdx
Ec: 2.6.-.-
Engineered: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Strain: Strain 168
Gene: Pdxt
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 [De3]
Expression_system_vector_type: Pet24b
Expression_system_plasmid: Pet-Bspdx2, Pet-Bsyaae
symmetry Space Group: P 21 21 21
R_factor 0.180 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.440 81.606 117.285 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.73 Å
ligand
enzyme Transferase E.C.2.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of a bacterial pyridoxal 5'-phosphate synthase complex., Strohmeier M, Raschle T, Mazurkiewicz J, Rippe K, Sinning I, Fitzpatrick TB, Tews I, Proc Natl Acad Sci U S A. 2006 Dec 11;. PMID:17159152
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (2nv0.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (2nv0.pdb2.gz) 34 Kb
  • CSU: Contacts of Structural Units for 2NV0
  • Likely Quarternary Molecular Structure file(s) for 2NV0
  • Structure Factors (319 Kb)
  • Retrieve 2NV0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NV0 from S2C, [Save to disk]
  • Re-refined 2nv0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2NV0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NV0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2NV0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nv0_B] [2nv0_A] [2nv0]
  • SWISS-PROT database: [P37528]
  • Domain organization of [PDXT_BACSU] by SWISSPFAM
  • Other resources with information on 2NV0
  • Community annotation for 2NV0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science