2NZ5 Oxidoreductase date Nov 22, 2006
title Structure And Function Studies Of Cytochrome P450 158a1 From Streptomyces Coelicolor A3(2)
authors B.Zhao, D.C.Lamb, S.L.Kelly, M.R.Waterman
compound source
Molecule: Cytochrome P450 Cyp158a1
Chain: A, B
Engineered: Yes
Organism_scientific: Streptomyces Coelicolor
Organism_taxid: 100226
Strain: A3(2)
Gene: Sc8f11.24c
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet17b
symmetry Space Group: C 1 2 1
R_factor 0.235 R_Free 0.293
crystal
cell
length a length b length c angle alpha angle beta angle gamma
192.267 44.859 105.052 90.00 97.76 90.00
method X-Ray Diffractionresolution 2.35 Å
ligand 226, HEM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDifferent binding modes of two flaviolin substrate molecules in cytochrome P450 158A1 (CYP158A1) compared to CYP158A2., Zhao B, Lamb DC, Lei L, Kelly SL, Yuan H, Hachey DL, Waterman MR, Biochemistry. 2007 Jul 31;46(30):8725-33. Epub 2007 Jul 6. PMID:17614370
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (2nz5.pdb1.gz) 131 Kb
  • LPC: Ligand-Protein Contacts for 2NZ5
  • CSU: Contacts of Structural Units for 2NZ5
  • Likely Quarternary Molecular Structure file(s) for 2NZ5
  • Structure Factors (623 Kb)
  • Retrieve 2NZ5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NZ5 from S2C, [Save to disk]
  • Re-refined 2nz5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2NZ5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NZ5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2NZ5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nz5_A] [2nz5_B] [2nz5]
  • SWISS-PROT database: [Q9KZF5]
  • Domain organization of [Q9KZF5_STRCO] by SWISSPFAM
  • Other resources with information on 2NZ5
  • Community annotation for 2NZ5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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