2NZJ Signaling Protein date Nov 23, 2006
title The Crystal Structure Of Rem1 In Complex With Gdp
authors A.P.Turnbull, E.Papagrigoriou, E.Ugochukwu, J.M.Elkins, M.Sounda X.Yang, F.Gorrec, C.Umeano, E.Salah, N.Burgess, C.Johansson, G.Be O.Gileadi, J.Bray, B.Marsden, S.Watts, F.Von Delft, J.Weigelt, A. C.H.Arrowsmith, M.Sundstrom, D.Doyle, Structural Genomics Cons (Sgc)
compound source
Molecule: Gtp-Binding Protein Rem 1
Chain: A, B, C, D
Synonym: Rad And Gem-Like Gtp-Binding Protein 1, Gtpase-Reg Endothelial Cell Sprouting;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rem1, Ges, Rem
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-R3rosetta
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 21 21 21
R_factor 0.225 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.640 102.284 165.565 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand CL, GDP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (2nzj.pdb1.gz) 25 Kb
  • Biological Unit Coordinates (2nzj.pdb2.gz) 26 Kb
  • Biological Unit Coordinates (2nzj.pdb3.gz) 26 Kb
  • Biological Unit Coordinates (2nzj.pdb4.gz) 25 Kb
  • Biological Unit Coordinates (2nzj.pdb5.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 2NZJ
  • CSU: Contacts of Structural Units for 2NZJ
  • Likely Quarternary Molecular Structure file(s) for 2NZJ
  • Structure Factors (198 Kb)
  • Retrieve 2NZJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NZJ from S2C, [Save to disk]
  • Re-refined 2nzj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2NZJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NZJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2NZJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nzj_B] [2nzj_D] [2nzj_A] [2nzj] [2nzj_C]
  • SWISS-PROT database: [O75628]
  • Domain organization of [REM1_HUMAN] by SWISSPFAM
  • Domain found in 2NZJ: [small_GTPase ] by SMART
  • Other resources with information on 2NZJ
  • Community annotation for 2NZJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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