2O50 Oxidoreductase date Dec 05, 2006
title The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrie Reductase
authors S.P.Muench, S.T.Prigge, R.Mcleod, J.B.Rafferty, D.W.Rice
compound source
Molecule: Enoyl-Acyl Carrier Reductase
Chain: A, B
Fragment: Residues 103-417
Ec: 1.3.1.9
Engineered: Yes
Organism_scientific: Toxoplasma Gondii
Organism_taxid: 383379
Strain: Rh
Gene: Enr
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-Codon Plus (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmalc2x
symmetry Space Group: P 32 2 1
R_factor 0.209 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.004 76.004 187.471 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.90 Å
ligand MSE enzyme Oxidoreductase E.C.1.3.1.9 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStudies of Toxoplasma gondii and Plasmodium falciparum enoyl acyl carrier protein reductase and implications for the development of antiparasitic agents., Muench SP, Prigge ST, McLeod R, Rafferty JB, Kirisits MJ, Roberts CW, Mui EJ, Rice DW, Acta Crystallogr D Biol Crystallogr. 2007 Mar;63(Pt 3):328-38. Epub 2007, Feb 21. PMID:17327670
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (2o50.pdb1.gz) 165 Kb
  • LPC: Ligand-Protein Contacts for 2O50
  • CSU: Contacts of Structural Units for 2O50
  • Likely Quarternary Molecular Structure file(s) for 2O50
  • Structure Factors (218 Kb)
  • Retrieve 2O50 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2O50 from S2C, [Save to disk]
  • Re-refined 2o50 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2O50 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2O50
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2O50, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2o50_B] [2o50] [2o50_A]
  • SWISS-PROT database: [Q6UCJ9]
  • Domain organization of [Q6UCJ9_TOXGO] by SWISSPFAM
  • Other resources with information on 2O50
  • Community annotation for 2O50 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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