2O5T Oxygen Storage Transport date Dec 06, 2006
title Cobalt Horse Heart Myoglobin, Oxidized
authors G.B.Richter-Addo, Z.N.Zahran, L.Chooback, D.M.Copeland, A.H.West
compound source
Molecule: Myoglobin
Chain: X
 Organism_scientific: Equus Caballus
Organism_common: Horse
Organism_taxid: 9796
Organ: Heart
symmetry Space Group: P 1 21 1
R_factor 0.193 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.315 28.746 63.034 90.00 106.49 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand COH, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceCrystal structures of manganese- and cobalt-substituted myoglobin in complex with NO and nitrite reveal unusual ligand conformations., Zahran ZN, Chooback L, Copeland DM, West AH, Richter-Addo GB, J Inorg Biochem. 2007 Aug 25;. PMID:17905436
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (2o5t.pdb1.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 2O5T
  • CSU: Contacts of Structural Units for 2O5T
  • Likely Quarternary Molecular Structure file(s) for 2O5T
  • Structure Factors (227 Kb)
  • Retrieve 2O5T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2O5T from S2C, [Save to disk]
  • Re-refined 2o5t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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    • Visual 3D analysis of 2O5T
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2O5T, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2o5t] [2o5t_X]
  • SWISS-PROT database: [P68082]
  • Domain organization of [MYG_HORSE] by SWISSPFAM
    • Other resources with information on 2O5T
  • Community annotation for 2O5T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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