2O6Q	Immune System	date	Dec 08, 2006
title	Structural Diversity Of The Hagfish Variable Lymphocyte Rece
authors	J.O.Lee, H.M.Kim, S.C.Oh
compound		source
Molecule: Variable Lymphocyte Receptor A Chain: A Fragment: Leucine-Rich Repeat (Lrr), Residues 23-292 Synonym: Variable Lymphocyte Receptor A29 Engineered: Yes		Organism_scientific: Eptatretus Burgeri Organism_common: Inshore Hagfish Organism_taxid: 7764 Gene: Vlra Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Hi5 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pvl1393
symmetry	Space Group: P 32 2 1	R_factor 0.227 R_Free 0.264
crystal cell	length a length b length c angle alpha angle beta angle gamma 95.226 95.226 77.556 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.50 Å
Primary reference	Structural diversity of the hagfish variable lymphocyte receptors., Kim HM, Oh SC, Lim KJ, Kasamatsu J, Heo JY, Park BS, Lee H, Yoo OJ, Kasahara M, Lee JO, J Biol Chem. 2007 Mar 2;282(9):6726-32. Epub 2006 Dec 27. PMID:17192264

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (2o6q.pdb1.gz) 46 Kb CSU: Contacts of Structural Units for 2O6Q Likely Quarternary Molecular Structure file(s) for 2O6Q Structure Factors (184 Kb) Retrieve 2O6Q in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2O6Q from S2C, [Save to disk] Re-refined 2o6q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2O6Q in 3D

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Visual 3D analysis of 2O6Q

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2O6Q, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2o6q_A] [2o6q] SWISS-PROT database: [Q32R26] Domain organization of [Q32R26_EPTBU] by SWISSPFAM Domains found in 2O6Q: [LRR] [LRRCT] [LRRNT] [LRR_TYP ] by SMART

Other resources with information on 2O6Q

Community annotation for 2O6Q at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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