2OF2	Transferase	date	Jan 02, 2007
title	Crystal Structure Of Furanopyrimidine 8 Bound To Lck
authors	M.W.Martin
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Lck Chain: A Fragment: Lck Kinase Domain, Residues 230-500 Synonym: P56-Lck, Lymphocyte Cell-Specific Protein-Tyrosine Lsk, T Cell- Specific Protein-Tyrosine Kinase; Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Lck Expression_system: Insect Cell Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 21 21 21	R_factor 0.260 R_Free 0.261
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.200 74.300 92.000 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	547 BindingDB	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of novel 2,3-diarylfuro[2,3-b]pyridin-4-amines as potent and selective inhibitors of Lck: Synthesis, SAR, and pharmacokinetic properties., Martin MW, Newcomb J, Nunes JJ, Bemis JE, McGowan DC, White RD, Buchanan JL, Dimauro EF, Boucher C, Faust T, Hsieh F, Huang X, Lee JH, Schneider S, Turci SM, Zhu X, Bioorg Med Chem Lett. 2007 Apr 15;17(8):2299-304. Epub 2007 Jan 24. PMID:17276681

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (2of2.pdb1.gz) 47 Kb LPC: Ligand-Protein Contacts for 2OF2 CSU: Contacts of Structural Units for 2OF2 Likely Quarternary Molecular Structure file(s) for 2OF2 Retrieve 2OF2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OF2 from S2C, [Save to disk]

View 2OF2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OF2

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OF2, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2of2] [2of2_A] SWISS-PROT database: [P06239] Domain organization of [LCK_HUMAN] by SWISSPFAM Domain found in 2OF2: [TyrKc ] by SMART

Other resources with information on 2OF2

Community annotation for 2OF2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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