2OFU	Transferase	date	Jan 04, 2007
title	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bo
authors	X.Huang
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Lck Chain: A Fragment: Lck Kinase Domain, Residues 229-501 Synonym: P56-Lck, Lymphocyte Cell-Specific Protein-Tyrosine Lsk, T Cell- Specific Protein-Tyrosine Kinase; Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Lck Expression_system: Insect Cell Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 21 21 21	R_factor 0.228 R_Free 0.291
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.430 73.530 92.810 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	1N9, PTR, SO4 BindingDB	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Novel 2-aminopyrimidine carbamates as potent and orally active inhibitors of Lck: synthesis, SAR, and in vivo antiinflammatory activity., Martin MW, Newcomb J, Nunes JJ, McGowan DC, Armistead DM, Boucher C, Buchanan JL, Buckner W, Chai L, Elbaum D, Epstein LF, Faust T, Flynn S, Gallant P, Gore A, Gu Y, Hsieh F, Huang X, Lee JH, Metz D, Middleton S, Mohn D, Morgenstern K, Morrison MJ, Novak PM, Oliveira-dos-Santos A, Powers D, Rose P, Schneider S, Sell S, Tudor Y, Turci SM, Welcher AA, White RD, Zack D, Zhao H, Zhu L, Zhu X, Ghiron C, Amouzegh P, Ermann M, Jenkins J, Johnston D, Napier S, Power E, J Med Chem. 2006 Aug 10;49(16):4981-91. PMID:16884310

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (2ofu.pdb1.gz) 52 Kb LPC: Ligand-Protein Contacts for 2OFU CSU: Contacts of Structural Units for 2OFU Likely Quarternary Molecular Structure file(s) for 2OFU Retrieve 2OFU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OFU from S2C, [Save to disk]

View 2OFU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OFU

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OFU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ofu_A] [2ofu] SWISS-PROT database: [P06239] Domain organization of [LCK_HUMAN] by SWISSPFAM Domain found in 2OFU: [TyrKc ] by SMART

Other resources with information on 2OFU

Community annotation for 2OFU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---