2OMW	Cell Invasion Cell Adhesion	date	Jan 23, 2007
title	Crystal Structure Of Inla S192n Y369smec1 Complex
authors	T.Wollert, D.W.Heinz, W.D.Schubert
compound		source
Molecule: Internalin-A Chain: A Fragment: Internalin Domain Engineered: Yes Mutation: Yes		Organism_scientific: Listeria Monocytogenes Organism_taxid: 169963 Strain: Egd-E Gene: Inla Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex
Molecule: Epithelial-Cadherin Chain: B Fragment: N-Terminal Domain Of Murine E-Cadherin Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: C57bl6j Gene: Cdh1 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex
symmetry	Space Group: P 1 21 1	R_factor 0.165 R_Free 0.207
crystal cell	length a length b length c angle alpha angle beta angle gamma 55.510 112.281 55.941 90.00 101.53 90.00
method	X-Ray Diffraction	resolution	1.85 Å
ligand	CL	enzyme
Gene Ontology	Chain Function Process Component B
Primary reference	Extending the host range of Listeria monocytogenes by rational protein design., Wollert T, Pasche B, Rochon M, Deppenmeier S, van den Heuvel J, Gruber AD, Heinz DW, Lengeling A, Schubert WD, Cell. 2007 Jun 1;129(5):891-902. PMID:17540170

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk] Biological Unit Coordinates (2omw.pdb1.gz) 112 Kb LPC: Ligand-Protein Contacts for 2OMW CSU: Contacts of Structural Units for 2OMW Likely Quarternary Molecular Structure file(s) for 2OMW Structure Factors (978 Kb) Retrieve 2OMW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OMW from S2C, [Save to disk] Re-refined 2omw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OMW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OMW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OMW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2omw_A] [2omw_B] [2omw] SWISS-PROT database: [P09803] [P25146] Domain organization of [CADH1_MOUSE] [INLA_LISMO] by SWISSPFAM Domains found in 2OMW: [CA] [LRR ] by SMART

Other resources with information on 2OMW

Community annotation for 2OMW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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