2ONE	Lyase	date	Sep 08, 1997
title	Asymmetric Yeast Enolase Dimer Complexed With Resolved 2'- Phosphoglycerate And Phosphoenolpyruvate
authors	L.Lebioda
compound		source
Molecule: Enolase Chain: A, B Synonym: 2-Phospho-D-Glycerate Hydrolase Ec: 4.2.1.11		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932
symmetry	Space Group: P 1 21 1	R_factor 0.137 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.100 110.000 66.200 90.00 113.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	2PG, LI, MG, PEP	enzyme	Lyase E.C.4.2.1.11 BRENDA
note	2ONE (Molecule of the Month:pdb50)
related structures	by homologous chain: 1EBH, 1P48
Gene Ontology	Chain Function Process Component A, B
Primary reference	Mechanism of enolase: the crystal structure of asymmetric dimer enolase-2-phospho-D-glycerate/enolase-phosphoenolpyruvate at 2.0 A resolution., Zhang E, Brewer JM, Minor W, Carreira LA, Lebioda L, Biochemistry 1997 Oct 14;36(41):12526-34. PMID:9376357

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (144 Kb) [Save to disk] Biological Unit Coordinates (2one.pdb1.gz) 138 Kb LPC: Ligand-Protein Contacts for 2ONE CSU: Contacts of Structural Units for 2ONE Likely Quarternary Molecular Structure file(s) for 2ONE Retrieve 2ONE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2ONE from S2C, [Save to disk]

View 2ONE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2ONE

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2ONE, from MSDmotif at EBI Genome occurence of 2ONE's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d2onea2, region A:1-141 [Jmol] [rasmolscript] [script source]     - Domain d2onea1, region A:142-436 [Jmol] [rasmolscript] [script source]     - Domain d2oneb2, region B:1-141 [Jmol] [rasmolscript] [script source]     - Domain d2oneb1, region B:142-436 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2one_B] [2one_A] [2one] SWISS-PROT database: [P00924] Domain organization of [ENO1_YEAST] by SWISSPFAM Domains found in 2ONE: [Enolase_C] [Enolase_N ] by SMART

Other resources with information on 2ONE

Community annotation for 2ONE at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 2ONE from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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