2OR2 Lyase date Feb 01, 2007
title Structure Of The W47aw242a Mutant Of Bacterial Phosphatidyl Specific Phospholipase C
authors C.Shao, X.Shi, H.Wehbi, C.Zambonelli, J.F.Head, B.A.Seaton, M.F.Ro
compound source
Molecule: 1-Phosphatidylinositol Phosphodiesterase
Chain: A, B
Synonym: Phosphatidylinositol Diacylglycerol-Lyase, Phosphatidylinositol-Specific Phospholipase C, Pi-Plc;
Ec: 4.6.1.13
Engineered: Yes
Mutation: Yes
Organism_scientific: Bacillus Thuringiensis
Organism_taxid: 1428
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 21 21 21
R_factor 0.186 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.424 70.028 154.138 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.84 Å
ligand
enzyme Lyase E.C.4.6.1.13 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDimer structure of an interfacially impaired phosphatidylinositol-specific phospholipase C., Shao C, Shi X, Wehbi H, Zambonelli C, Head JF, Seaton BA, Roberts MF, J Biol Chem. 2007 Jan 9;. PMID:17213187
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (2or2.pdb1.gz) 106 Kb
  • CSU: Contacts of Structural Units for 2OR2
  • Likely Quarternary Molecular Structure file(s) for 2OR2
  • Structure Factors (833 Kb)
  • Retrieve 2OR2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OR2 from S2C, [Save to disk]
  • Re-refined 2or2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OR2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OR2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OR2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2or2_A] [2or2] [2or2_B]
  • SWISS-PROT database: [P08954]
  • Domain organization of [PLC_BACTU] by SWISSPFAM
  • Domain found in 2OR2: [PLCXc ] by SMART
  • Other resources with information on 2OR2
  • Community annotation for 2OR2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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