2OSE	Isomerase	date	Feb 05, 2007
title	Crystal Structure Of The Mimivirus Cyclophilin
authors	E.Z.Eisenmesser, V.Thai, P.Renesto, D.Raoult
compound		source
Molecule: Probable Peptidyl-Prolyl Cis-Trans Isomerase Chain: A Synonym: Ppiase, Rotamase Ec: 5.2.1.8 Engineered: Yes		Organism_scientific: Mimivirus Organism_taxid: 315393 Gene: Mimi_l605 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15-B
symmetry	Space Group: P 21 3	R_factor 0.214 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 95.032 95.032 95.032 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.04 Å
ligand	CL	enzyme	Isomerase E.C.5.2.1.8 BRENDA
Gene	MIMI
Gene Ontology	Chain Function Process Component A
Primary reference	Structural, biochemical, and in vivo characterization of the first virally encoded cyclophilin from the Mimivirus., Thai V, Renesto P, Fowler CA, Brown DJ, Davis T, Gu W, Pollock DD, Kern D, Raoult D, Eisenmesser EZ, J Mol Biol. 2008 Apr 18;378(1):71-86. Epub 2007 Aug 29. PMID:18342330

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk] Biological Unit Coordinates (2ose.pdb1.gz) 96 Kb LPC: Ligand-Protein Contacts for 2OSE CSU: Contacts of Structural Units for 2OSE Likely Quarternary Molecular Structure file(s) for 2OSE Structure Factors (137 Kb) Retrieve 2OSE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OSE from S2C, [Save to disk] Re-refined 2ose structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OSE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OSE

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OSE, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ose] [2ose_A] SWISS-PROT database: [Q5UP71] Domain organization of [PPIL_MIMIV] by SWISSPFAM

Other resources with information on 2OSE

Community annotation for 2OSE at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---