2OTF Hydrolase date Feb 08, 2007
title Crystal Structure Of The Complex Formed Between Phospholipas Atenolol At 1.95 A Resolution
authors S.Kumar, N.Singh, S.Sharma, A.Bhushan, P.Kaur, T.P.Singh
compound source
Molecule: Phospholipase A2 Vrv-Pl-Viiia
Chain: A
Synonym: Phosphatidylcholine 2-Acylhydrolase, Dpla2, Phosphodiesterase;
Ec: 3.1.1.4
 Organism_scientific: Daboia Russellii Pulchella
Organism_taxid: 97228
Strain: Pulchella
symmetry Space Group: P 43
R_factor 0.188 R_Free 0.211
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.280 53.280 48.390 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand 2TN enzyme Hydrolase E.C.3.1.1.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • Biological Unit Coordinates (2otf.pdb1.gz) 22 Kb
  • LPC: Ligand-Protein Contacts for 2OTF
  • CSU: Contacts of Structural Units for 2OTF
  • Likely Quarternary Molecular Structure file(s) for 2OTF
  • Retrieve 2OTF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OTF from S2C, [Save to disk]
    • View 2OTF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2OTF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OTF, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2otf] [2otf_A]
  • SWISS-PROT database: [P59071]
  • Domain organization of [PA28_DABRR] by SWISSPFAM
  • Domain found in 2OTF: [PA2c ] by SMART
    • Other resources with information on 2OTF
  • Community annotation for 2OTF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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