2OVG Transcription date Feb 13, 2007
title Lambda Cro Q27pa29sk32q Triple Mutant At 1.35 A In Space G
authors B.M.Hall, A.Heroux, S.A.Roberts, M.H.Cordes
compound source
Molecule: Phage Lambda Cro
Chain: A
Engineered: Yes
Mutation: Yes
Organism_scientific: Enterobacteria Phage Lambda
Organism_taxid: 10710
Gene: Cro
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21b
symmetry Space Group: P 32 2 1
R_factor 0.132 R_Free 0.171
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.524 50.524 48.148 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.35 Å
ligand EPE, SO4 enzyme
note 2OVG is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTwo structures of a lambda Cro variant highlight dimer flexibility but disfavor major dimer distortions upon specific binding of cognate DNA., Hall BM, Roberts SA, Heroux A, Cordes MH, J Mol Biol. 2008 Jan 18;375(3):802-11. Epub 2007 Nov 6. PMID:18054042
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (2ovg.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (2ovg.pdb2.gz) 25 Kb
  • Biological Unit Coordinates (2ovg.pdb3.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 2OVG
  • CSU: Contacts of Structural Units for 2OVG
  • Likely Quarternary Molecular Structure file(s) for 2OVG
  • Structure Factors (109 Kb)
  • Retrieve 2OVG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OVG from S2C, [Save to disk]
  • Re-refined 2ovg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OVG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OVG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OVG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ovg] [2ovg_A]
  • SWISS-PROT database: [P03040]
  • Domain organization of [RCRO_LAMBD] by SWISSPFAM
  • Other resources with information on 2OVG
  • Community annotation for 2OVG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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