2OX4	Isomerase	date	Feb 19, 2007
title	Crystal Structure Of Putative Dehydratase From Zymomonas Mob
authors	Y.Patskovsky, R.Toro, J.M.Sauder, J.C.Freeman, K.Bain, T.Gheyi, S.R.Wasserman, D.Smith, J.Gerlt, S.K.Burley, S.C.Almo, New York Research Center For Structural Genomics (Nysgxrc)
compound		source
Molecule: Putative Mandelate Racemase Chain: A, B, C, D, E, F, G, H Ec: 5.1.2.2 Engineered: Yes		Organism_scientific: Zymomonas Mobilis Organism_taxid: 542 Strain: Zm4, Cp4 Atcc: 31821 Gene: Rspa, Zmo1264 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet Expression_system_plasmid: Bc-Psgx3(Bc)
symmetry	Space Group: P 21 21 2	R_factor 0.144 R_Free 0.186
crystal cell	length a length b length c angle alpha angle beta angle gamma 190.178 190.409 85.922 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	CL, GOL, MG	enzyme	Isomerase E.C.5.1.2.2 BRENDA
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (566 Kb) [Save to disk] Biological Unit Coordinates (2ox4.pdb1.gz) 558 Kb LPC: Ligand-Protein Contacts for 2OX4 CSU: Contacts of Structural Units for 2OX4 Likely Quarternary Molecular Structure file(s) for 2OX4 Structure Factors (2933 Kb) Retrieve 2OX4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OX4 from S2C, [Save to disk] Re-refined 2ox4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OX4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OX4

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OX4, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ox4_H] [2ox4_F] [2ox4_A] [2ox4_G] [2ox4] [2ox4_E] [2ox4_D] [2ox4_C] [2ox4_B] SWISS-PROT database: [Q5NN22] Domain organization of [Q5NN22_ZYMMO] by SWISSPFAM Domain found in 2OX4: [MR_MLE ] by SMART

Other resources with information on 2OX4

Community annotation for 2OX4 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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