2OXJ Unknown Function date Feb 20, 2007
title Helix Bundle Quaternary Structure From Alphabeta-Peptide Fo Gcn4-P1 With Beta-Residues At B And F Heptad Positions.
authors W.S.Horne, J.L.Price, J.L.Keck, S.H.Gellman
compound source
Molecule: Hybrid Alphabeta Peptide Based On The Gcn4-P1 Se Heptad Positions B And F Substituted With Beta-Amino Acids;
Chain: A, B, C
Engineered: Yes
Synthetic: Yes
Other_details: Synthetic Peptide
symmetry Space Group: P 21 21 21
R_factor 0.219 R_Free 0.283
crystal
cell
length a length b length c angle alpha angle beta angle gamma
25.728 37.641 92.511 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand ACE, ACT, B3A, B3D, B3E, B3K, B3S, B3X, B3Y, BAL enzyme
Primary referenceHelix Bundle Quaternary Structure from alpha/beta-Peptide Foldamers., Horne WS, Price JL, Keck JL, Gellman SH, J Am Chem Soc. 2007 Apr 11;129(14):4178-80. Epub 2007 Mar 16. PMID:17362016
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (2oxj.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 2OXJ
  • CSU: Contacts of Structural Units for 2OXJ
  • Likely Quarternary Molecular Structure file(s) for 2OXJ
  • Structure Factors (46 Kb)
  • Retrieve 2OXJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OXJ from S2C, [Save to disk]
  • Re-refined 2oxj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OXJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OXJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OXJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2oxj_A] [2oxj_C] [2oxj_B] [2oxj]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2OXJ
  • Community annotation for 2OXJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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