2P33 Transferase date Mar 08, 2007
title Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-Termi (Jnk) Inhibitors
authors T.A.Ceska, A.Platt, M.Fortunato, K.M.Dickson, A.Sharpe
compound source
Molecule: C-Jun N-Terminal Kinase 3
Chain: A
Fragment: Protein Kinase Domain, Residues 40-402
Synonym: Mitogen-Activated Protein Kinase 10, Stress-Activa Protein Kinase Jnk3, Map Kinase P49 3f12;
Ec: 2.7.11.24
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mapk10, Jnk3, Jnk3a, Prkm10
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.253 R_Free 0.304
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.820 71.520 107.360 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand J07 BindingDB enzyme Transferase E.C.2.7.11.24 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSynthesis and SAR of aminopyrimidines as novel c-Jun N-terminal kinase (JNK) inhibitors., Alam M, Beevers RE, Ceska T, Davenport RJ, Dickson KM, Fortunato M, Gowers L, Haughan AF, James LA, Jones MW, Kinsella N, Lowe C, Meissner JW, Nicolas AL, Perry BG, Phillips DJ, Pitt WR, Platt A, Ratcliffe AJ, Sharpe A, Tait LJ, Bioorg Med Chem Lett. 2007 Jun 15;17(12):3463-7. Epub 2007 Mar 30. PMID:17459703
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2p33.pdb1.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 2P33
  • CSU: Contacts of Structural Units for 2P33
  • Likely Quarternary Molecular Structure file(s) for 2P33
  • Structure Factors (399 Kb)
  • Retrieve 2P33 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2P33 from S2C, [Save to disk]
  • Re-refined 2p33 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2P33 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2P33
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2P33, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2p33] [2p33_A]
  • SWISS-PROT database: [P53779]
  • Domain organization of [MK10_HUMAN] by SWISSPFAM
  • Domain found in 2P33: [S_TKc ] by SMART
  • Other resources with information on 2P33
  • Community annotation for 2P33 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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