2P4U	Hydrolase	date	Mar 13, 2007
title	Crystal Structure Of Acid Phosphatase 1 (Acp1) From Mus Musc
authors	J.B.Bonanno, J.Freeman, K.T.Bain, B.Wu, W.Xu, D.Smith, S.Wasserman J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Structural Genomics (Nysgxrc)
compound		source
Molecule: Acid Phosphatase 1 Chain: A, B, C, D Synonym: Acp1 Protein Ec: 3.1.3.2 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: Fvbn Gene: Acp1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet Expression_system_plasmid: Modified Pet26
symmetry	Space Group: P 1 21 1	R_factor 0.184 R_Free 0.236
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.716 168.539 42.721 90.00 90.96 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	PO4	enzyme	Hydrolase E.C.3.1.3.2 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B protein tyrosine phosphatase... non-membrane spanning protei...
Primary reference	Structural genomics of protein phosphatases., Almo SC, Bonanno JB, Sauder JM, Emtage S, Dilorenzo TP, Malashkevich V, Wasserman SR, Swaminathan S, Eswaramoorthy S, Agarwal R, Kumaran D, Madegowda M, Ragumani S, Patskovsky Y, Alvarado J, Ramagopal UA, Faber-Barata J, Chance MR, Sali A, Fiser A, Zhang ZY, Lawrence DS, Burley SK, J Struct Funct Genomics. 2007 Sep;8(2-3):121-40. Epub 2007 Dec 5. PMID:18058037

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (108 Kb) [Save to disk] Biological Unit Coordinates (2p4u.pdb1.gz) 27 Kb Biological Unit Coordinates (2p4u.pdb2.gz) 27 Kb Biological Unit Coordinates (2p4u.pdb3.gz) 28 Kb Biological Unit Coordinates (2p4u.pdb4.gz) 27 Kb LPC: Ligand-Protein Contacts for 2P4U CSU: Contacts of Structural Units for 2P4U Likely Quarternary Molecular Structure file(s) for 2P4U Structure Factors (359 Kb) Retrieve 2P4U in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2P4U from S2C, [Save to disk] Re-refined 2p4u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2P4U in 3D

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Visual 3D analysis of 2P4U

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2P4U, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2p4u_A] [2p4u_B] [2p4u] [2p4u_C] [2p4u_D] SWISS-PROT database: [Q561M1] Domain organization of [Q561M1_MOUSE] by SWISSPFAM Domain found in 2P4U: [LMWPc ] by SMART

Other resources with information on 2P4U

Community annotation for 2P4U at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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