2P57 Metal Binding Protein date Mar 14, 2007
title Gap Domain Of Znf289, An Id1-Regulated Zinc Finger Protein
authors Y.Tong, S.Dimov, L.Shen, H.Zhu, W.Tempel, R.Landry, C.H.Arrowsmith A.M.Edwards, M.Sundstrom, J.Weigelt, A.Bochkarev, H.Park, Struct Genomics Consortium (Sgc)
compound source
Molecule: Gtpase-Activating Protein Znf289
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Znf289
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-Codonplus(De3)-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a-Lic
symmetry Space Group: P 21 21 21
R_factor 0.196 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.027 41.165 72.808 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand UNX, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • Biological Unit Coordinates (2p57.pdb1.gz) 21 Kb
  • LPC: Ligand-Protein Contacts for 2P57
  • CSU: Contacts of Structural Units for 2P57
  • Likely Quarternary Molecular Structure file(s) for 2P57
  • Structure Factors (169 Kb)
  • Retrieve 2P57 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2P57 from S2C, [Save to disk]
  • Re-refined 2p57 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2P57 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2P57
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2P57, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2p57] [2p57_A]
  • SWISS-PROT database: [Q8N6H7]
  • Domain organization of [ARFG2_HUMAN] by SWISSPFAM
  • Domain found in 2P57: [ArfGap ] by SMART
  • Other resources with information on 2P57
  • Community annotation for 2P57 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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